Laboratory Science Program
Small-Scale Sequencing Plans for 2007
This page is updated at the beginning of every month.
| Organism | Proposer | Affiliation | Status* | Public Release** | Amount Proposed (Mb) |
|---|---|---|---|---|---|
| Five Archaea (Methanohalobium evestigatum, Methanobacterium formicicum, Halococcoides, Ferroglobus placidus, and Acidianus sp. JP7) | Kyrpides | LBNL | Acidianus in production, others pending | 50 | |
| Aspergillus terreus EST | Baker | PNNL | In production | 10.0 | |
| ChIP-enriched binding sequences | Stubbs | LLNL | In production | 33.0 | |
| CRISPR loci of Leptospirillum | Banfield | In production | |||
| Cochliobolus heterostrophus | Turgeon | Cornell University | In finishing | 336.0 | |
| Columbia River Microbiota | Magnuson | PNNL | Pending | 5.0 | |
| Low Dose DiTags | Anderson | BNL | Done (draft) | 180.0 | |
| Microbial community actively decaying poplar biomass | van der Lelie | BNL | In production | 200 | |
| Microbial diversity in tropical and temperate forests | Pett-Ridge | LLNL | 12 Finished | 10.8 | |
| New Orleans Floodwaters | Andersen | LBNL | Done (draft) | 10.0 | |
| Soluble protein domains | Terwilliger | LANL | Pending | 6.5 | |
| Tallgrass Prairie soil | Bailey | PNNL | Finished | 10.0 | |
| Thielavia terrestris | Berka | Novozymes | In production | 294.0 | |
| Tremella mesenterica | Heitman | Duke University | In production | 168.0 | |
| Viruses in nasopharyngeal swab samples from healthy subjects | Mariella | LLNL | In production | 10 |
*"Pending" indicates that we are waiting for DNA or the DNA is waiting to enter the production process; "in production" includes both library creation and production sequencing; "draft assembly" is the first assembly, made without finishing the genome; "finishing" is postproduction work not carried out for all organisms; "final assembly" is the process of assembling the finished genome; "annotation" refers to automated finding of genes and assignment of functions; genomes on which we do not plan further work are labeled "done".
**"Reads released" indicates that reads have been sent to the GenBank Trace Archive; release dates indicate the date an assembly was made publicly available.
