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bioenergy research at JGI

Latest News

T. reesei

October 22, 2009
Model Microbial Community for Studying Expanding Dead Zones Characterized. Among the many changes in the ocean is the expansion of oxygen-deficient or oxygen minimum zones (OMZs), also known as dead zones, which affect the processes by which carbon is captured and sequestered on the seafloor and alter the microbial activities that impact the rate and magnitude of ocean carbon sequestration.

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Nikos K.

October 8, 2009
Establishing Standard Definitions for Genome Sequences. In 1996, researchers from major genome sequencing centers around the world convened on the island of Bermuda and defined a finished genome as a gapless sequence with a nucleotide error rate of one or less in 10,000 bases.

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Genomic Model

September 9, 2009
New Genomic Model Defines Microbes by Diet—Provides Tool for Tracking Environmental Change. In line with the U.S. Department of Energy (DOE) interest in characterizing the biotic factors involved in global carbon cycling, the DOE Joint Genome Institute (JGI) characterizes a diverse array of plants, microorganisms, and the communities in which they reside to inform options for reducing and stabilizing atmospheric greenhouse gases.

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The U.S. Department of Energy Joint Genome Institute, supported by the DOE Office of Science, unites the expertise of five national laboratories—Lawrence Berkeley, Lawrence Livermore, Los Alamos, Oak Ridge, and Pacific Northwest—along with the HudsonAlpha Institute for Biotechnology to advance genomics in support of the DOE missions related to clean energy generation and environmental characterization and cleanup. JGI is operated by the University of California for the U.S. Department of Energy.


Announcements

CSP Microbial Isolate Proposal Deadline: The next submission deadline is 1/6/10.

JGI User Meeting: Register now online! The meeting is March 24-26, 2010 in Walnut Creek, CA

JGI Employees: the JGI Emergency Operations Info page is now available!

Gap Resolution software is now available for academic use: Gap Resolution was developed by DOE Joint Genome Institute to improve Newbler genome assemblies by automating the closure of sequence gaps caused by repetitive regions in the DNA. If you are interested in acquiring this software, please contact degilbert@lbl.gov