Community Sequencing Program
Sequencing Plans for 2007
For status information, see the Genome Projects section.
| Organism | Proposer | Affiliation |
|---|---|---|
| Large Eukaryotes | ||
| Aquilegia formosa Why? |
Hodges | UC Santa Barbara |
| Brachypodium distachyon (Poaceae) Why? |
Vogel | USDA-ARS |
| Gossypium (cotton) Why? |
Paterson | Univ. of Georgia |
| Manihot esculenta (cassava) Why? |
Fauquet | Danforth Plant Science Ctr. |
| Small Eukaryotes | ||
| Cryphonectria parasitica (chestnut blight fungus) Why? |
Nuss | Univ. of Maryland Biotech. Inst. |
| Reef-building corals and dinoflagellate symbionts (ESTs from Acropora palmata, Montastraea faveolata, and Symbiodinium clade A and clade B) Why? |
Medina | Univ. of California, Merced |
| Fragilariopsis cylindrus (a diatom) Why? |
Mock | Univ. of Washington |
| Guillardia theta and Bigelowiella natans Why? |
Archibald | Dalhousie Univ. |
| Heterobasidion annosum Why? |
Stenlid | Swedish Univ. of Agricultural Sciences |
| Three species of Neurospora (N. discreta, N. tetrasperma FGSC2508, N. tetrasperma FGSC2509) Why? |
Taylor | Univ. of California, Berkeley |
| Peronosporomycete mtDNAs (26) Why? |
Hudspeth | Northern Illinois Univ. |
| Pleurotus ostreatus (oyster mushroom) Why? |
Pisabarro | Public Univ. of Navarre |
| Riftia pachyptila (deep-sea tubeworm) Why? |
Girguis | Harvard Univ. |
| Switchgrass Why? |
Tobias | USDA-ARS |
| Tetranychus urticae (two-spotted spider mite) Why? |
Grbic | Univ. of Western Ontario |
| Thellungiella halophila Why? |
Schumaker | Univ. of Arizona |
| Mating loci from Volvox carteri and Chlamydomonas reinhardtii Why? |
Umen | Salk Inst. |
| Bacteria and Archaea | ||
| Candidatus Amoebophilus asiaticus 5a2 and Encarsia symbiont Cand. Cardinium hertigii Why? |
Horn | Univ. of Vienna |
| Actinobacteria (Arthrobacter chlorophenolicus A6 and Micrococcus luteus) Why? |
Jansson | Swedish Univ. of Agricultural Sciences |
| Beggiatoa alba Why? |
Mueller | Morgan State Univ. |
| Burkholderia (B. ambifaria IOP40-10, B. ambifaria MEX-5, B. graminis C4D1M, B. sp. SEMIA 6167, B. sp. strain H160, B. sp. strain 144F, B. sp. strain CCGE1001, B. sp. strain CCGE1003, B. cepacia ATCC 25416) Why? |
Tiedje | Michigan State Univ. |
| Anaerobic benzene-degrading methanogenic consortium (Chloroflexi, Desulfobacterium sp., Desulfosporosinus sp., Methanomicrobiales-like sp., Methanosaeta sp., Methanosarcinales-like spp) Why? |
Edwards | Univ. of Toronto |
| Crenothrix polyspora enrichment Why? |
Wagner | Univ. of Vienna |
| Cyanothece strains Why? |
Pakrasi | Washington Univ. |
| Dechlorinating community (KB-1) (Dehalococcoides, Geobacter, Methanosarcina, Spirochete, Sporomusa) Why? |
Edwards | Univ. of Toronto |
| Lithifying mat communities of marine stromatolites (Desulfovibrio sp. H0407_12.1Lac, Schizothrix gebeleni sp.A and sp. B, Solentia sp., Sulfate Reducing Bacterium sp. B, and sulfur-oxidizing bacteria) Why? |
Decho | Univ. of South Carolina |
| Candidatus Endomicrobium trichonymphae, Elusimicrobium minutum Pei191 Why? |
Brune | Max Planck Institute for Terrestrial Microbiology |
| Symbiont from the basal clade of the Frankiaceae Why? |
Benson | Univ. of Connecticut |
| Six freshwater iron-oxidizing bacteria (Gallionella ferruginea capsiferriformans ES-2, Leptothrix cholodnii SP-6, Rhodobacter sp. str. SW2, Rhodopseudomonas palustris TIE-1, and Sideroxydans lithotrophicus, Acidovorax delafieldii 2AN) Why? |
Emerson | Amer. Type Culture Collection |
| Microbiome resident in the foregut of the tammar wallaby (Macropus eugenii) Why? |
McSweeney | CSIRO |
| Methanomicrococcus blatticola Why? |
Hackstein | Radboud Univ. Nijmegen |
| Methylocella silvestris BL2, Methylocapsa acidiphila B2, and Beijerinckia indica subsp. indica Why? |
Dunfield | Inst. of Geological and Nuclear Sciences, New Zealand |
| Pedomicrobium manganicum Why? |
Mackenzie, | Univ. of Texas, Houston |
| Microbial community (plasmid mobilome) in wastewater treatment plant Why? |
van der Meer | Univ. of Lausanne |
| Rhizobium leguminosarum bv trifolii (strains WSM1325 and WSM2304) Why? |
Reeve | Murdoch Univ. |
| Near-shore anoxic basin: Saanich Inlet Why? |
Hallam | Univ. of British Columbia |
| Thauera sp. MZ1T Why? |
Sayler | Univ. of Tennessee |
| Thermolithobacter ferrireducens Why? |
Wiegel | Univ. of Georgia |
| Haloalkaliphilic sulfur-oxidizing bacteria (Thioalkalivibrio sp. HL-EbGR7, and T. sp. K90 mix) Why? |
Muyzer | Delft Univ. of Technology |
