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… ancestral sequence reconstruction”,  PNAS.  2023,  120, e2218248120. doi : 10.1073/pnas.2218248120 …

… metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our little section … and I hope you’ll enjoy it too. So here we go– episode 13 with Paco Barona-Goméz. DAN UDWARY: Hey Alison. ALISON …

… welcome back to Natural Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In … talk and that now I can bring it to you. So enjoy, episode 11 of Natural Prodcast. Alison Takemura: Marnix, where are … a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on today. …

… this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … during the transition to the above JGI Data Policy. Pre-FY22 proposals: Proposals accepted before FY22 are transitioning away from producing use-restricted …

… in the open ocean .”  Current Biology , Volume 34 Issue 22. Krinos, A.I., Mars Brisbin, M., Hu, S.K. et al. (2024) “ …

… there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re … happening. And so we should have somewhere around 10, 11, 12 million BGCs in the database on the release, and …

… this is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about NRPS’s … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …

… the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies … microbiomes. mSystems0:e01744-24. https://doi.org/10.1128/msystems.01744-24 Oliver, T., Varghese, N., Roux, S. et … metagenomic time-series from Lake Mendota. Sci Data 11 , 966 (2024). https://doi.org/10.1038/s41597-024-03826-8 …

… like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix … or it could be a whole grad student thesis to synthesize a 13C-labeled version of your compound. So people have been growing methanotrophs and methylotrophs on 13c labeled one carbon compound some of the cheapest …

… from metagenomes. mSystems 9:e00888-24. https://doi.org/10.1128/msystems.00888-24 Coclet, C., Sorensen, P.O., Karaoz, … Neri U., Wolf, Y., Roux S., Camargo A.P., et al. (2022) Expansion of the global RNA virome reveals diverse … ISME J. 15, 1569–1584. https://doi.org/10.1038/s41396-020-00870-1 Roux, S. et al. (2019) Cryptic inoviruses …

… modules Currently 206 genomes have been selected with 11 published manuscripts published to-date Testimonials: … Resour Announc 0:e00891-25. https://doi.org/10.1128/mra.00891-25 . B. Christenson, I. Nouioui, C. Daum, M. … Geobacillus thermodenitrificans subsp. calidus DSM 22629. Microbiol Resour Announc. 2024. 0:e00527-24 . …