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… welcome back to Natural Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In … talk and that now I can bring it to you. So enjoy, episode 11 of Natural Prodcast. Alison Takemura: Marnix, where are … a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on today. …

… there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re … happening. And so we should have somewhere around 10, 11, 12 million BGCs in the database on the release, and … Metabolites Collaboratory SMC Workshop Materials from the 2023 JGI Annual Meeting Using the SMC Website API Endpoints …

… this is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) DAN UDWARY: Yeah, I think that might … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …

… With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) we are able to quantify isotope incorporation across a … genomes and other genomic elements (Vyshenska et al. 2023). … microbiomes. mSystems0:e01744-24. https://doi.org/10.1128/msystems.01744-24 Oliver, T., Varghese, N., Roux, S. et …

… list available at Google Scholar. Dutkiewicz, Z. et al (2025) “ Proposal of Patescibacterium danicum gen. nov., sp. … Communications , Volume 5 Issue 1. Wittmers, F. et al (2024) “ Non-photosynthetic lineages sibling to Cyanobacteria … Issue 22. Krinos, A.I., Mars Brisbin, M., Hu, S.K. et al. (2024) “ Missing microbial eukaryotes and misleading meta-omic …

… Coclet C, Camargo AP, Roux S. (2024) MVP: a modular viromics pipeline to identify, filter, … from metagenomes. mSystems 9:e00888-24. https://doi.org/10.1128/msystems.00888-24 Coclet, C., Sorensen, P.O., Karaoz, … global microbiome. Nat Commun 12, 3076. https://doi.org/10.1038/s41467-021-23402-7 Roux, S. and Emerson, J. (2022) …

… modules Currently 206 genomes have been selected with 11 published manuscripts published to-date Testimonials: … Resour Announc 0:e00891-25. https://doi.org/10.1128/mra.00891-25 . B. Christenson, I. Nouioui, C. Daum, M. … a human abdominal surgery wound Microbiol Resour Announc.  2025. 0:e01294-24. https://doi.org/10.1128/mra.01294-24   E. …

… So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain …

… never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … looking at emails and I just saw this pop up. And saw a C&E News job little box and I thought, wow, this would be … Non-model Bacteria Check out the agenda for the JGI’s 2021 Annual Genomics of Energy & Environment Meeting   …

… materials. The proposal submission deadline is March 31, 2026 .  … (CMMs). Click for a list of CMMs and the results of the 2023 DOE Critical Materials Assessment . While we expect most …

… then my lab pleaded mercy, and I said, OK, we’ll just do 2011 to present day. And it was still like 4,000 articles we … plants and bringing them back is not your jam, the good news is there’s this amazing resource that can be provided … can place a pre-order for the paperback (available June 2022). You might also enjoy Foodie Pharmacology – a science …