Sequencing

Sequencing Strategy Sequencing Plans and Progress Statistics Why Sequence Them? Information for Collaborators Protocols Genome Portal Site

FY2001 Sequencing for the
DOE Microbial Genome Program

For more information about the DOE Office of Science's Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce. This page is verified at the beginning of every month.

Organism Status* Public Release** Genome Size
Burkholderia xenovorans LB400 Finished Released 8 Mb
Chloroflexus aurantiacus J-10-fl Finished Released 1/14/2008 3 Mb
Cupriavidus metallidurans CH34 Finished Released 6.8 Mb
Cytophaga hutchinsonii ATCC 33406 Finished 7/17/2006 4.4 Mb
Desulfitobacterium halfniense DCB-2 Done (draft) 8/9/2006 4.7 Mb
Enterococcus faecium DO Done (draft) Released (draft) 2.8 Mb
Ferroplasma acidarmanus fer1 Finished Released (draft) 1.8 Mb
Magnetococcus sp. MC-1 Finished Released 4.7 Mb
Methanosarcina barkerii fusaro Finished Released 4.8 Mb
Nitrosomonas europaea ATCC 19718 Finished Released 2.8 Mb
Nostoc punctiforme PCC 73102 Finished Released 9.2 Mb
Novosphingobium aromaticivorans DSM 12444 Finished Released 4.2 Mb
Prochlorococcus marinus MED4 Finished Released 1.66 Mb
Prochlorococcus marinus MIT9313 Finished Released 2.4 Mb
Pseudomonas fluorescens PfO-1 Finished Released 6.7 Mb
Rhodobacter sphaeroides 2.4.1 Finished Released 4.6 Mb
Rhodopseudomonas palustris CGA009 Finished Released 5.5 Mb
Synechococcus sp. WH8102 Finished Released 2.4 mb
Thermobifida fusca YX Finished Released 3.6 Mb
Xylella fastidiosa Ann-1 Done (draft) Released (draft) 5.1 Mb
Xylella fastidiosa Dixon Done (draft) Released (draft) 2.6 Mb

*"Pending" indicates that we are waiting for DNA or the DNA is waiting to enter the production process; "in production" includes both library creation and production sequencing; "draft assembly" is the first assembly, made without finishing the genome; "finishing" is postproduction work not carried out for all organisms; "final assembly" is the process of assembling the finished genome; genomes on which we do not plan further work are labeled "done".

**"Reads released" indicates that reads have been sent to the GenBank Trace Archive; release dates indicate the date an assembly was made publicly available.